Gibbs
(Difference between revisions)
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The queue manager is [[SLURM]] and the following queues are available: | The queue manager is [[SLURM]] and the following queues are available: | ||
| − | * ''' | + | * '''gibs''': max nodes 4, max walltime 336:00:00 (2 weeks) |
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<nowiki>#</nowiki>SBATCH --job-name=''name'' | <nowiki>#</nowiki>SBATCH --job-name=''name'' | ||
<nowiki>#</nowiki>SBATCH --ntasks=''1'' | <nowiki>#</nowiki>SBATCH --ntasks=''1'' | ||
| − | <nowiki>#</nowiki>SBATCH --cpus-per-task='' | + | <nowiki>#</nowiki>SBATCH --cpus-per-task=''10'' |
<nowiki>#</nowiki>SBATCH --partition=gibbs | <nowiki>#</nowiki>SBATCH --partition=gibbs | ||
<nowiki>#</nowiki>SBATCH --account=gibbs | <nowiki>#</nowiki>SBATCH --account=gibbs | ||
Revision as of 14:28, 7 August 2021
Contents |
Description
Gibbs is equipped with the following software/hardware:
- 6 nodes with 2 x CPU Intel Xeon Octa Core (16 cores), 128 GB of RAM, 2 x 300 GB HD SAS (10 krpm), OS Red Hat Enterprise Linux Server release 6.3
- 4 nodes with 2 x CPU Intel Xeon 10 Core (20 cores), 128 GB of RAM, 2 x 300 GB HD SAS (10 krpm), OS Scientific Linux release 6.6
- 4 nodes with 1 x CPU Intel Xeon 24 Core, 256 GB of RAM, 2 x 300 GB HD SAS (10 krpm), OS Scientific Linux release 6.6
for a total of 14 nodes, 272 cores.
Access
- Linux and Mac OS users can login using a terminal. Windows 10 users can use the PowerShell.
The first step si to open a tunnel. Within the DiSC internet this can be simply done as:
ssh -L 2000:192.168.16.253:22 account@192.168.9.15 -p 7000
- or from outside the Department using
ssh -L 2000:192.168.16.253:22 account@147.162.63.10 -p 7000
- where "account" is the user's account.
Then, in a different shell, login as:
ssh -p 2000 account@localhost
Through port 2000 users can also transfer files directly via the tunnel using the command scp.
Queues
The queue manager is SLURM and the following queues are available:
- gibs: max nodes 4, max walltime 336:00:00 (2 weeks)
Example SLURM file
A typical SLURM script will be as follow (see the Support page for more help):
#SBATCH --job-name=name #SBATCH --ntasks=1 #SBATCH --cpus-per-task=10 #SBATCH --partition=gibbs #SBATCH --account=gibbs #SBATCH --time=100:00:00 commands to execute
where the parts in italic should be changed as appropriate.
